PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00792.1.g00060.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 258aa    MW: 27748.8 Da    PI: 4.9109
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00792.1.g00060.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.3e-20126175255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   +y+GVr+++ +g+W+AeIrdp+    r  r +lg+f+taeeAa+a+++a+ +++g
  Zpz_sc00792.1.g00060.1.sm.mk 126 RYRGVRQRP-WGKWAAEIRDPR----RaVRKWLGTFDTAEEAARAYDRAAVEFRG 175
                                   7********.**********82....48***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.8E-37126189IPR001471AP2/ERF domain
PfamPF008471.8E-13126175IPR001471AP2/ERF domain
SuperFamilySSF541716.08E-23126184IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.0E-31126183IPR001471AP2/ERF domain
PROSITE profilePS5103225.304126183IPR001471AP2/ERF domain
PRINTSPR003671.6E-11127138IPR001471AP2/ERF domain
CDDcd000181.79E-29129183No hitNo description
PRINTSPR003671.6E-11149165IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0050832Biological Processdefense response to fungus
GO:0051301Biological Processcell division
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MAAANNQECM ISFDGQFDDP SPSSSGAEPA AAPFAWRPIT PEQEHDVIVA ALLHVVSGYT  60
TPPPEVFPAA LACGVCGMER CLGCEFFAAD AAGVGALDGA EKTNAVAAAA PAVAGGQRRR  120
RKKKNRYRGV RQRPWGKWAA EIRDPRRAVR KWLGTFDTAE EAARAYDRAA VEFRGPRAKL  180
NFPFPEQLET PHDEAGAAAK SDTQSPSLCS GSANAENQSS GQQHGGEEMG EQLWDDLQEL  240
MKLDEGGSWF PPTSTSWN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-21123184264ATERF1
3gcc_A2e-21123184264ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117123RRRRKKK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00469DAPTransfer from AT4G34410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004973673.11e-105PREDICTED: ethylene-responsive transcription factor ERF109-like
SwissprotQ9SZ062e-32EF109_ARATH; Ethylene-responsive transcription factor ERF109
TrEMBLK3YJ181e-105K3YJ18_SETIT; Uncharacterized protein
STRINGSi014237m1e-104(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124236124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.13e-24redox responsive transcription factor 1